PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019178252.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 336aa MW: 37273.5 Da PI: 7.5409

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019178252.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.4	5.6e-32	92	145	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+av++LGG+e+AtPk +l+lm+vkgL ++hvkSHLQ+YR+ XP_019178252.1 92 PRLRWTPDLHLCFVQAVQRLGGQERATPKLVLQLMNVKGLNIAHVKSHLQMYRS 145 8****************************************************7 PP
2	Myb_DNA-binding	50.5	4.7e-16	93	144	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +v+av++lGg t+k++ + m+ kg+ ++ks++q+y+ XP_019178252.1 93 RLRWTPDLHLCFVQAVQRLGGQeraTPKLVLQLMNvKGLNIAHVKSHLQMYR 144 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MSDLSAPPNL RQTKMAESVV DLNMIPLDDG EEEEEIIINP KTSSSSNDQS DDDQLDEEEI 60 TTSNDGNGSS TAAASSGGSG GGVRQYVRSK VPRLRWTPDL HLCFVQAVQR LGGQERATPK 120 LVLQLMNVKG LNIAHVKSHL QMYRSKKVDD HGQVINERAG YHTGNTNNLL QNLWQLPMFD 180 RRIRSNFRYM NNSWSCSNAN WMSARNNNSI INGGLGMNKN MIFTGGPEWK RGHEALREAN 240 NAKPTQLQSG ESLIPSFING VSSPDIKWSS FSPAMKRNGG EKAVDLNLTL SMNLKREREQ 300 DDSNSRHCKR RCLDGGEEVD SSLSLSLSSS RSKCAF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	1e-38	G2-like family protein