PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019178112.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 334aa    MW: 36531.4 Da    PI: 7.0863
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019178112.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY107.28.2e-34185242259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYGqK vk+s++prsYYrCts++Cpvkk+vers +dp++v++tYeg+Hnh+
  XP_019178112.1 185 EDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCPVKKRVERSYQDPSIVITTYEGQHNHH 242
                     8********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MSEDLRDLYY HHPFQEDERS HGGFLYSNAG AGATSTNNNP HHSFLDPSSY MSFTDHLIGA  60
TEFGRPAFGF SSPHSSSAAD AAFSAMKDEQ KPSSMNAGDG GGGGGSNNIN ANETPVTPNS  120
SISSSSTEAA GDEDSNKGSK RDKQAMDASE DGEDKKENKG KKKAEKKQRQ PRFAFMTKSE  180
VDHLEDGYRW RKYGQKAVKN SPYPRSYYRC TSQKCPVKKR VERSYQDPSI VITTYEGQHN  240
HHIPTNLRGT IAGMLPPSLL TPSSPLLGGP PPPIAFPPEL LAQMQPPHHL FATHGANPFG  300
AAAFHQQNLA QLQLPPDFGL LQDMVPPIFF KQEP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18170.15e-52WRKY family protein