PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019177750.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family Dof
Protein Properties Length: 288aa    MW: 31193.7 Da    PI: 6.774
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019177750.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof118.13.4e-371772762
          zf-Dof  7 kcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                    +cprC s+ntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rk ++ +
  XP_019177750.1 17 TCPRCGSMNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKTRRPK 72
                    7**************************************************99865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MERSTATWKP NVEISPTCPR CGSMNTKFCY YNNYSLTQPR YFCKGCRRYW TKGGSLRNVP  60
VGGGCRKTRR PKSSSSIRLV DGHRRGGMFI AQEGISAAAD NNNPAAAAAA GGTNGPAPNI  120
DLAAVYANFM NQKPNPNPQP QPGGHIPETT TLANNNDGGG AGPSFEFSGY PAMLNVDYFV  180
PEDAMALQDG GFVVDEFGNN NNSAAALFQE QFCGESLPPI LPPHQELTTS EGWPNHNSDM  240
NMNMNMMFPL HTISAHHEPE VQGCPNHHTS SSASLFSIPT TYDSIFRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52440.12e-42Dof family protein