PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019177518.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 672aa MW: 76493 Da PI: 6.4191

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019177518.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	181.3	2.3e-56	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv +yLk+k++g+k+el evi+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++v XP_019177518.1 6 LPPGFRFHPTDEELVAYYLKRKINGRKIEL-EVIPEVDLYKCEPWDLPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVN 99 79**************************.99***********6434555777*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s + + vg+kktLv+y+grap+g +tdWvmheyrl XP_019177518.1 100 S-QMRSVGMKKTLVYYRGRAPHGARTDWVMHEYRL 133 .9999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 672 aa Download sequence
MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIELEVIPE VDLYKCEPWD LPGKSLLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QMRSVGMKKT LVYYRGRAPH 120 GARTDWVMHE YRLDERECEI QNGLQDAYAL CRVFKKSLTN TGPKIGDHYV SATSDRSSSM 180 DIYSEGRCEE MESSNYAMAA PPSAAAASCS SMAAAAVHGS PFHHHVAAAG PSTNDDKWMH 240 YLSDEAFSFH TPPPSSLPNY ATMPYPPSKV DIALECARLQ HRFMLPQLEV QDFPHVVSHV 300 DSRMMMPHHH HQSSFINHDN NPDIVQEILS VAQASQDLMN QDGWGGGGGY APTAAADDDF 360 SFLLPHNASQ FQDMGNFRFM DQLREDQNGG RNIEITDFAD EFKPDRMVEN LRWVGMSDKD 420 LEKTLLEDYK AVPIENVSGF NREGHEDHGG ESSQHNNLSD INDDFSLGFD NNNNFLSDGG 480 GDFSDSPSFE VYEKVEVKHG MFIASRQAAK TLYHQVVPST TVRIHRNLLV PTFPVSKFEA 540 NIVVDNKFMA FSRKMLIGVM KFTRPWRRMV STLVGVIAII LHTCWVYFVE LFMEAQEKNY 600 YYCCNFSGEK KSGDYDEWEI NFKKNKDSSI ADKNPRMTRR VDDKTTTAAP WPYLTLVLAL 660 STIWLHQNVT FF

Sequence ? help Back to Top

Protein Sequence Length: 672 aa Download sequence

MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIELEVIPE VDLYKCEPWD LPGKSLLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QMRSVGMKKT LVYYRGRAPH  120
GARTDWVMHE YRLDERECEI QNGLQDAYAL CRVFKKSLTN TGPKIGDHYV SATSDRSSSM  180
DIYSEGRCEE MESSNYAMAA PPSAAAASCS SMAAAAVHGS PFHHHVAAAG PSTNDDKWMH  240
YLSDEAFSFH TPPPSSLPNY ATMPYPPSKV DIALECARLQ HRFMLPQLEV QDFPHVVSHV  300
DSRMMMPHHH HQSSFINHDN NPDIVQEILS VAQASQDLMN QDGWGGGGGY APTAAADDDF  360
SFLLPHNASQ FQDMGNFRFM DQLREDQNGG RNIEITDFAD EFKPDRMVEN LRWVGMSDKD  420
LEKTLLEDYK AVPIENVSGF NREGHEDHGG ESSQHNNLSD INDDFSLGFD NNNNFLSDGG  480
GDFSDSPSFE VYEKVEVKHG MFIASRQAAK TLYHQVVPST TVRIHRNLLV PTFPVSKFEA  540
NIVVDNKFMA FSRKMLIGVM KFTRPWRRMV STLVGVIAII LHTCWVYFVE LFMEAQEKNY  600
YYCCNFSGEK KSGDYDEWEI NFKKNKDSSI ADKNPRMTRR VDDKTTTAAP WPYLTLVLAL  660
STIWLHQNVT FF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-143	NAC family protein