PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019177398.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MYB | ||||||||
Protein Properties | Length: 268aa MW: 30232.7 Da PI: 8.3876 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.1 | 2e-13 | 10 | 57 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed +l+ +v+++G ++W+ ++ g++R++k+c++rw +yl XP_019177398.1 10 KGPWTEQEDVQLAFYVNLFGDRRWDFLSKISGLKRSGKSCRLRWVNYL 57 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 54.8 | 2.2e-17 | 63 | 106 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T+ E+ l+++++ +lG++ W++Iar+++ gRt++++k++w++ XP_019177398.1 63 RGKMTPNEERLILELHSKLGNR-WSKIARKLP-GRTDNEIKNYWRT 106 89********************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 268 aa Download sequence |
MRIVGEEVRK GPWTEQEDVQ LAFYVNLFGD RRWDFLSKIS GLKRSGKSCR LRWVNYLHPG 60 LKRGKMTPNE ERLILELHSK LGNRWSKIAR KLPGRTDNEI KNYWRTQMRK EAHDKKKKKQ 120 QQKGGGGGAS SSPSSLSNSS SSSSGSPGEE STPAVVGANE RAFYDTGGFV EAPPPPPRAD 180 NGEKMGGGVK VYSMDEIWKA IESPEIQESH GGGERSMIGS AIWDDYSVWT MDYDYQEDER 240 NLVAPVSDQF YSWFDNQLDF AHNTFLTG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59780.3 | 2e-65 | MYB family protein |