PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019177347.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 302aa MW: 33830.5 Da PI: 4.5061 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.6 | 5.2e-19 | 58 | 111 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe ++++ e++ +LA++lgL+ rqV vWFqNrRa++k XP_019177347.1 58 KKRRLSVEQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 111 56689************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 129.4 | 1.4e-41 | 57 | 149 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrls eqvk+LE++Fe e+kLeperKv+la+eLglqprqvavWFqnrRAR+ktkqlE+dy +Lk++yd+lk++ e+L+ ++e+L +++++ XP_019177347.1 57 EKKRRLSVEQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDSLKHNYESLQLDKESLLKQIRD 149 69*************************************************************************************999976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 302 aa Download sequence |
MKRSLGSSDS LGALMSICPP TTDDPSQGNS SHVYAGEFQS MLEGLDEEDG GGGRVAEKKR 60 RLSVEQVKAL EKNFEVENKL EPERKVKLAQ ELGLQPRQVA VWFQNRRARW KTKQLERDYG 120 VLKANYDSLK HNYESLQLDK ESLLKQIRDL KTKLNGEMKE EDKDAKPNSD EIELNFEAAA 180 AAAAAAVPAD FKDGSSDSDS SVILNEETSS YHSSEAFLIS HEPFPDCFKL SEHFKPATAV 240 LADAAAVHKL AYPPLQLVKI EEQFSSEESC STLFSDEQAP TLPWYCPDPD PESWNNWKED 300 EQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 58 | 87 | KKRRLSVEQVKALEKNFEVENKLEPERKVK |
2 | 106 | 114 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22430.1 | 6e-61 | HD-ZIP family protein |