PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019177323.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

CAMTA

Protein Properties

Length: 1055aa MW: 119942 Da PI: 6.3878

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019177323.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	181.7	8.3e-57	21	137	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 l+ ++rwl++ ei++iL+n++k++++ e++++p++gsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+++vl+cyYah+een++fqr XP_019177323.1 21 LEAQHRWLRPAEICEILKNYQKFQIAPEPPNTPPNGSLFLFDRKVLRYFRKDGHKWRKKKDGKTVKEAHERLKAGSIDVLHCYYAHGEENENFQR 115 5679***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+yw+Leee+++ivlvhy+evk XP_019177323.1 116 RSYWMLEEEMSHIVLVHYREVK 137 *****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1055 aa Download sequence
MATESRRYGL NAQLDIDQIL LEAQHRWLRP AEICEILKNY QKFQIAPEPP NTPPNGSLFL 60 FDRKVLRYFR KDGHKWRKKK DGKTVKEAHE RLKAGSIDVL HCYYAHGEEN ENFQRRSYWM 120 LEEEMSHIVL VHYREVKGNR VNFNHVKESQ IAIPGYQESE DTTSLNSAVA SEYEDAESAV 180 YIQQKNPVAH SFLEVQSTMM QKAQDELSVS LYPVPLANDH QGQFSAISGI NFPSIVQGNQ 240 NRNTANIYVP CQGHGFTSWK NIEETSTARY QPALSSMNSD TISAMHGQED TTIGFTNNLG 300 NNQKLMNCVY ALEEWQTSEG DSLQSSEWSV DKKLNPDQAC DFSTKLNEEK LMEFCDFPTK 360 HKHPMQNDLQ VQLNNADGGN FAKTKLDSDL NMRINIDHSA LKQPLLNGFL RQELKKLDSF 420 DRWINKELED VNEPHMQTSS GNYWDNVGNE DGVDESTIAS QVQRDTYVLS PSLSQEQFFS 480 ITEFSPNWAY AGTEIKILIT GRFLKSQQEV DQCNWACMFG ELEVPAEVIS DGVLRCLTPI 540 QKVGRVPFYV TCSNRLACSE VREFEFRVNE IENGNSGSYK ESLLNMRFGN LLSLESVSFE 600 NSVPGNMDYV SHLTSKINSL LKEDNSEWEH MFPHTSEDQL HQKFLKEKLR FWLLQKVVVG 660 GKGPNVLDES GQGVLHFAAA LDYDWAIPPT LVAGVNVNFR DVNGWTALHW AAFCGRERMV 720 VFLIALGAAP GALTDPTPQH PSGRTPADLA SSNGHKGIAG YLAEASLSTH LSSLELKENK 780 EDKNGDASGV KAIHVVSERA ATPVNDGDWP YGLSLKDSLA AVRNATQAAA RIHQVFRVQS 840 FQRKQIKEYG DGEVGLSDER ALSLLAVRKN RAGQNNEPLH VAAMRIQNKF RSWKGRKDFL 900 LIRQQIIKIQ AHVRGHQVRK NYRKITWSVG ILEKVILRWR RKGSGLRGFK SEALAEGHSM 960 QDQPKQEDDY DFLKEGRKQT EERLQTALAR VQSMVQYPEA RDQYRRLLNV VSEMQETKNK 1020 YDRVLKRSGR TYEFDEDLIE LEAFLNDDTF MPTAS

Sequence ? help Back to Top

Protein Sequence Length: 1055 aa Download sequence

MATESRRYGL NAQLDIDQIL LEAQHRWLRP AEICEILKNY QKFQIAPEPP NTPPNGSLFL  60
FDRKVLRYFR KDGHKWRKKK DGKTVKEAHE RLKAGSIDVL HCYYAHGEEN ENFQRRSYWM  120
LEEEMSHIVL VHYREVKGNR VNFNHVKESQ IAIPGYQESE DTTSLNSAVA SEYEDAESAV  180
YIQQKNPVAH SFLEVQSTMM QKAQDELSVS LYPVPLANDH QGQFSAISGI NFPSIVQGNQ  240
NRNTANIYVP CQGHGFTSWK NIEETSTARY QPALSSMNSD TISAMHGQED TTIGFTNNLG  300
NNQKLMNCVY ALEEWQTSEG DSLQSSEWSV DKKLNPDQAC DFSTKLNEEK LMEFCDFPTK  360
HKHPMQNDLQ VQLNNADGGN FAKTKLDSDL NMRINIDHSA LKQPLLNGFL RQELKKLDSF  420
DRWINKELED VNEPHMQTSS GNYWDNVGNE DGVDESTIAS QVQRDTYVLS PSLSQEQFFS  480
ITEFSPNWAY AGTEIKILIT GRFLKSQQEV DQCNWACMFG ELEVPAEVIS DGVLRCLTPI  540
QKVGRVPFYV TCSNRLACSE VREFEFRVNE IENGNSGSYK ESLLNMRFGN LLSLESVSFE  600
NSVPGNMDYV SHLTSKINSL LKEDNSEWEH MFPHTSEDQL HQKFLKEKLR FWLLQKVVVG  660
GKGPNVLDES GQGVLHFAAA LDYDWAIPPT LVAGVNVNFR DVNGWTALHW AAFCGRERMV  720
VFLIALGAAP GALTDPTPQH PSGRTPADLA SSNGHKGIAG YLAEASLSTH LSSLELKENK  780
EDKNGDASGV KAIHVVSERA ATPVNDGDWP YGLSLKDSLA AVRNATQAAA RIHQVFRVQS  840
FQRKQIKEYG DGEVGLSDER ALSLLAVRKN RAGQNNEPLH VAAMRIQNKF RSWKGRKDFL  900
LIRQQIIKIQ AHVRGHQVRK NYRKITWSVG ILEKVILRWR RKGSGLRGFK SEALAEGHSM  960
QDQPKQEDDY DFLKEGRKQT EERLQTALAR VQSMVQYPEA RDQYRRLLNV VSEMQETKNK  1020
YDRVLKRSGR TYEFDEDLIE LEAFLNDDTF MPTAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein