PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019177249.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NAC | ||||||||
Protein Properties | Length: 512aa MW: 57108.5 Da PI: 4.5617 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 164.3 | 4.5e-51 | 6 | 134 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtd e++v+yLk+k+ gkkl+++e+i+e++iy++ PwdLp k ++k+++ ewyfF++r++ky++g r nrat++gyWk+tg+d++v+ XP_019177249.1 6 LPPGFRFHPTDVEIIVYYLKRKIMGKKLHFFEAISEINIYRFSPWDLPdKsSLKSKDLEWYFFCPRERKYNSGGRMNRATETGYWKTTGRDRPVV 100 79*********************************************95346667777************************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+ ktLvf++g+apkg++tdWv+heyr+ XP_019177249.1 101 Y-NERTVGMVKTLVFHEGHAPKGKRTDWVIHEYRI 134 *.999****************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 512 aa Download sequence |
MGRTFLPPGF RFHPTDVEII VYYLKRKIMG KKLHFFEAIS EINIYRFSPW DLPDKSSLKS 60 KDLEWYFFCP RERKYNSGGR MNRATETGYW KTTGRDRPVV YNERTVGMVK TLVFHEGHAP 120 KGKRTDWVIH EYRIEDEETL QDSYVLCKVF KKSGPGPKNG AQYGAPFNEE DWEDCENCDI 180 PFAIPMHPSN QNCSSVTGMI DPECSSRQPS SEPGSSAIPP AKLPDPINQN CTYVADMIDP 240 GCSSRQPSNE PGPSLSRLHA DEVRPNNQNC SVFTGTIDPG NTCSRSLANP GPSLAVPHSS 300 EVPPDDDDIS QFFASFLEDT DLLPIENNEN VNCCNQGLNV DMMPCMDGND VYTAFGGRDN 360 FADLSGGRSY PSGSLVGDHP PNLLFPQDDA PFLELNDLVI PVDHCTRTSE ADPLVEENLY 420 SSNASFLRME HFNYGGNFSG GNQFIPTQSQ LQVLPQHYTQ QVTGIGFNAS QGYNTMPVTG 480 MEFNASQGYN AMQVSGIEFN ASQGYNAMQL WF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G09330.3 | 9e-77 | NAC family protein |