PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019177248.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 519aa MW: 57480.4 Da PI: 4.4185

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019177248.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	118.3	7.2e-37	2	106	25	128
NAM 25 gkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkge 117 gkkl+++e+i+e++iy++ PwdLp k ++k+++ ewyfF++r++ky++g r nrat++gyWk+tg+d++v+ ++++vg+ ktLvf++g+apkg+ XP_019177248.1 2 GKKLHFFEAISEINIYRFSPWDLPdKsSLKSKDLEWYFFCPRERKYNSGGRMNRATETGYWKTTGRDRPVVY-NERTVGMVKTLVFHEGHAPKGK 95 567888999************95346667777**********************************.999*************** PP NAM 118 ktdWvmheyrl 128 +tdWv+heyr+ XP_019177248.1 96 RTDWVIHEYRI 106 *******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 519 aa Download sequence
MGKKLHFFEA ISEINIYRFS PWDLPDKSSL KSKDLEWYFF CPRERKYNSG GRMNRATETG 60 YWKTTGRDRP VVYNERTVGM VKTLVFHEGH APKGKRTDWV IHEYRIEDEE TLQDSYVLCK 120 VFKKSGPGPK NGAQYGAPFN EEDWEDCENC DIPFAIPMHP SNQNCSSVTG MIDPECSSRQ 180 PSSEPGSSAI PPAKLPDPIN QNCTYVADMI DPGCSSRQPS NEPGPSLSRL HADEVRPNNQ 240 NCSVFTGTID PGNTCSRSLA NPGPSLAVPH SSEVPPDDDD ISQFFASFLE DTDLLPIENN 300 ENVNCCNQGL NVDMMPCMDG NDVYTAFGGR DNFADLSGGR SYPSGSLVGD HPPNLLFPQD 360 DAPFLELNDL VIPVDHCTRT SEADPLVEEN LYSSNASFLR MEHFNYGGNF SGGNQFIPTQ 420 SQLQVLPQHY TQQVTGIGFN ASQGYNTMPV TGMEFNASQG YNAMQVSGIE FNASQGYNAM 480 QVSGIEFNAS QGFDYGFDTM MHEHGMITSP AADRDQHRG

Sequence ? help Back to Top

Protein Sequence Length: 519 aa Download sequence

MGKKLHFFEA ISEINIYRFS PWDLPDKSSL KSKDLEWYFF CPRERKYNSG GRMNRATETG  60
YWKTTGRDRP VVYNERTVGM VKTLVFHEGH APKGKRTDWV IHEYRIEDEE TLQDSYVLCK  120
VFKKSGPGPK NGAQYGAPFN EEDWEDCENC DIPFAIPMHP SNQNCSSVTG MIDPECSSRQ  180
PSSEPGSSAI PPAKLPDPIN QNCTYVADMI DPGCSSRQPS NEPGPSLSRL HADEVRPNNQ  240
NCSVFTGTID PGNTCSRSLA NPGPSLAVPH SSEVPPDDDD ISQFFASFLE DTDLLPIENN  300
ENVNCCNQGL NVDMMPCMDG NDVYTAFGGR DNFADLSGGR SYPSGSLVGD HPPNLLFPQD  360
DAPFLELNDL VIPVDHCTRT SEADPLVEEN LYSSNASFLR MEHFNYGGNF SGGNQFIPTQ  420
SQLQVLPQHY TQQVTGIGFN ASQGYNTMPV TGMEFNASQG YNAMQVSGIE FNASQGYNAM  480
QVSGIEFNAS QGFDYGFDTM MHEHGMITSP AADRDQHRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09330.3	8e-59	NAC family protein