PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019177205.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 298aa    MW: 33501.1 Da    PI: 6.3108
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019177205.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.35.6e-13103154155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +r++h ++Er+RR+++N+ ++ Lr+ lP++   ++++ + a+i+  +++++k+L+
  XP_019177205.1 103 QRMTHIAVERNRRRQVNDYLAVLRSFLPPS---YAQRGDQASIVGGTINFVKELE 154
                     79****************************...*******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MDLENVTFLQ DPFGFDFKDC YAMAMGGLLD CYGGGYGFEE DKLSCEALSS SVEQTASNGC  60
WDYSPPPEVL PVEYSPAETA ALGRPRKRKR TKSSKNKEDI ENQRMTHIAV ERNRRRQVND  120
YLAVLRSFLP PSYAQRGDQA SIVGGTINFV KELEQLLQFL EVHKQVKNQI SSNYANNSHY  180
PFSTFFTFPQ YSTPKTHSPT AAASPPQKLS TVADVEVALV ESHASVKVLS TKQPKQLVKM  240
VKWFQAMRLT VLHLNVTTID PMVLYSFSLK VEDDCHLMSV NEIATAVHEM VAMIQEDI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1104115RMTHIAVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.14e-70bHLH family protein