PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019177103.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 276aa    MW: 31112.9 Da    PI: 5.8715
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019177103.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.52.4e-08156203455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR +iN+++  L++++P +     k +  a +L + ++Y++sLq
  XP_019177103.1 156 SHSLAERVRRGKINERLKCLQDIVPGC----YKTMGMAVMLDEIINYVQSLQ 203
                     8*************************9....35599999**********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MADHFRQLFP LLNVDPSMEV AQFPELNPNF GDLSGPNFHT LMGFSQQDQF LSQVPSAAEF  60
SPQEYAVNSL HYEAKTGHRA VILPENDALE TKMKPADYTT MESCSANSSS PAVSEIGTRR  120
KHSVGKGKRK KSSEEEDTKP MEVVHVRARR GQATDSHSLA ERVRRGKINE RLKCLQDIVP  180
GCYKTMGMAV MLDEIINYVQ SLQNQVEFLS MKLTEASSYY DFNSETEIIE TMQRAKAYED  240
MKMQKQVKDG YEGLSTSNPF DQQSFGCYPS LPHNTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18400.19e-64bHLH family protein