PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019176874.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 168aa MW: 19194.3 Da PI: 4.262 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.5 | 5e-16 | 10 | 53 | 2 | 49 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaa 49 +++GVr ++ rgrW++eIrdp+ r kr +lg++++ eeAa +++a XP_019176874.1 10 KFRGVRKRP-RGRWAVEIRDPT----RgKRLWLGTYDSQEEAAVVYDNA 53 89*******.8*********84....35******************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence |
MPSFDACSRK FRGVRKRPRG RWAVEIRDPT RGKRLWLGTY DSQEEAAVVY DNASVRPKGP 60 DAVTNFPTKM VTETAVNTSL TPSNATLSPA SVPRYDDFTP FDSPVQSDFI PNEAAVVNEF 120 KALDNLDFEN FDFDFDFDFD FDFFGLTIFP LFATHCVHEF DEFDAEIY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11140.1 | 2e-25 | ERF family protein |