PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019176869.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 215aa MW: 24720.7 Da PI: 4.9797 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.5 | 5.9e-17 | 55 | 104 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++kGVr ++ rgrWv+eIr+p r kr +lg++++ +eAa ++++a +l+g XP_019176869.1 55 KFKGVRKRP-RGRWVVEIRVPA----RgKRLWLGTYDSRKEAATLYDNASVRLKG 104 89*******.8*********82....36*********************999987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MLWNRVLRIV VTEGNATDSS DDEGERAVGM WRRVKRHMWG IKFVPTPPFD ACSRKFKGVR 60 KRPRGRWVVE IRVPARGKRL WLGTYDSRKE AATLYDNASV RLKGPNAVTN FPKKTVTETA 120 VDTSLTSRNA ALSPASVLRY DDFTPFDSPV QSDFIPNEAA AVNEFFALDN LDFENFDFDF 180 DFDFDFDFDF FGLPSFPLFA THCVHEFDEF DADIY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11140.1 | 5e-25 | ERF family protein |