PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019176858.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ARR-B | ||||||||
Protein Properties | Length: 540aa MW: 58950 Da PI: 7.3872 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 68.3 | 1.3e-21 | 226 | 275 | 4 | 54 |
G2-like 4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 +Wt eLHe+F++av+qL G + Pk+ilelm+v+gLt+ +v+SHLQk R XP_019176858.1 226 TEWTVELHEKFMNAVHQL-GDGRCYPKEILELMNVPGLTRMQVASHLQKCR 275 58****************.9*****************************98 PP | |||||||
2 | Myb_DNA-binding | 39.9 | 1e-12 | 227 | 274 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqky 47 WT e++e++ +av+qlG g +k I + m+ g+t+ q+ s++qk XP_019176858.1 227 EWTVELHEKFMNAVHQLGDGrcYPKEILELMNvPGLTRMQVASHLQKC 274 6*********************************************97 PP | |||||||
3 | Response_reg | 48.5 | 4.7e-17 | 30 | 137 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH..HHHHESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealell..kekdpDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl++d +++++ ++l+++ y +v+++d +++al l ke+++D ++ i+ p+m+G++ll++ + +l +i++ +++e e+a++ ++ G XP_019176858.1 30 VLLSDHDHKFLASTVEMLKRHFY-KVTVVDCASDALSVLsqKEQKFDAVIANINSPDMQGFKLLRQAVSM--DLIVILLCDEEEAEMAVRLIEHG 121 79999999***************.***************655555******************9987775..5********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a l Kp+ +e l + XP_019176858.1 122 AFLLLQKPMCQETLKN 137 ********99888865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 540 aa Download sequence |
MWRLPEYQIN NPYVNIPMAS HHRVTNGIHV LLSDHDHKFL ASTVEMLKRH FYKVTVVDCA 60 SDALSVLSQK EQKFDAVIAN INSPDMQGFK LLRQAVSMDL IVILLCDEEE AEMAVRLIEH 120 GAFLLLQKPM CQETLKNLWQ HVVRERNLQR GKEMMLMEKN NRELAVINNG GGGADRGKGV 180 RVEENENYEM SYRGKGKRTR QQQSLNESTQ MMMNPGLARV KRKTCTEWTV ELHEKFMNAV 240 HQLGDGRCYP KEILELMNVP GLTRMQVASH LQKCRNDNWR APEERRAPPT SSASLASESA 300 SRNEQRRFGT MPRLTAAAAA AAAAAAAAAG NSQTERQQLE STTSPEVQSS QSNGSGRGDS 360 SQTQIHRQYL TIGDVSKLES SSPPSIVRPV AASTSAAAAA IAAAVATFDA TSGQASIVGS 420 LNYGSGGGLQ GLGGGSGGGG GSLFGNKDNF SDNPSNTTTG DDSYATPPPP RLRTLQSEEF 480 FTFDVDYEYL INGFPDNNAR QGGVGLQAPN HNNTSFNIGQ RQEANKAQTS EMMNVAKMSP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16857.2 | 8e-39 | ARR-B family protein |