PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019175740.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 454aa MW: 50659.2 Da PI: 6.6032

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019175740.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	113.5	2.2e-35	40	183	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.......lelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.... 79 lp+G++F+Ptd+el+ e+L++kv +++ + + +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ XP_019175740.1 40 LPAGVKFDPTDQELI-EHLEAKVLARDqskshplI---DefipTIEGEdGICYTHPEKLP-GVTRDGLNRHFFHRPSKAYTTGTRKRRKIQtecd 129 799**********.999998855554443...144334766646******.555667799**************7333455 PP NAM 80 ....sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_019175740.1 130 lqggETRWHKTGKTRPVMV-HGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 183 5544778********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 454 aa Download sequence
MNKSGSDLID AKLEEHQLCG SKHCPECGHK LEGKPDWVGL PAGVKFDPTD QELIEHLEAK 60 VLARDQSKSH PLIDEFIPTI EGEDGICYTH PEKLPGVTRD GLNRHFFHRP SKAYTTGTRK 120 RRKIQTECDL QGGETRWHKT GKTRPVMVHG KQKGCKKILV LYTNFGKNRK PEKTNWVMHQ 180 YHLGQHEEEK EGELVVSKIF YQTQPRQCNW SSERSTAGAA AVGGGAGEAS SEPTSCSSSK 240 EINVGSSHRD ELSAAVVGAA MSSYTAMDIQ QLKADHFGFL PFRKNFDEQA GIGGGEGSRA 300 MEGAAAAVAE HGGACEERDI SDQHQSHAYH VTHDPPQHHQ HHHHHHQIAA TQFHIISPPP 360 LHHASVNILD HNIDPFQVPR MLLPNDNFQC FWQQAQQQQQ QQEGGRSTSG LEELIMGCTS 420 TDMKEETSIP NPQEAEWIKY SSFWPDPDNP DHHG

Sequence ? help Back to Top

Protein Sequence Length: 454 aa Download sequence

MNKSGSDLID AKLEEHQLCG SKHCPECGHK LEGKPDWVGL PAGVKFDPTD QELIEHLEAK  60
VLARDQSKSH PLIDEFIPTI EGEDGICYTH PEKLPGVTRD GLNRHFFHRP SKAYTTGTRK  120
RRKIQTECDL QGGETRWHKT GKTRPVMVHG KQKGCKKILV LYTNFGKNRK PEKTNWVMHQ  180
YHLGQHEEEK EGELVVSKIF YQTQPRQCNW SSERSTAGAA AVGGGAGEAS SEPTSCSSSK  240
EINVGSSHRD ELSAAVVGAA MSSYTAMDIQ QLKADHFGFL PFRKNFDEQA GIGGGEGSRA  300
MEGAAAAVAE HGGACEERDI SDQHQSHAYH VTHDPPQHHQ HHHHHHQIAA TQFHIISPPP  360
LHHASVNILD HNIDPFQVPR MLLPNDNFQC FWQQAQQQQQ QQEGGRSTSG LEELIMGCTS  420
TDMKEETSIP NPQEAEWIKY SSFWPDPDNP DHHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-140	NAC family protein