PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019175210.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 337aa    MW: 36334.1 Da    PI: 6.176
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019175210.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH50.73.3e-16155201455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      hn  E+rRR+riN+++  L+ l+P++      K +Ka++L +A+eY+k+Lq
  XP_019175210.1 155 VHNLSEKRRRSRINEKLKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 201
                     6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MADPYGVNPR HPHSLESEDM SSFVHNLLHG SSASAAAAAG GGGGLFARST AVASNNLESR  60
MRDGSSAAVV ESSCSLNLSD PCGFYGAQVK EDAVNAFSSA GIGDCEAITS SKGIEFAHDN  120
KVDDFAFTLE DCETSDAPSN QVQLRGSKRS RSAEVHNLSE KRRRSRINEK LKALQNLIPN  180
SNKTDKASML DEAIEYLKQL QLQVQMLTMR NGLSLYPGYF QGSLQSIQLP PSGSAFDENV  240
IPKTRGATNF SGNQEISMQN RFEISHQNPS AQQNVSSMKN TTNSESPLVF ETPMQNHYGM  300
LNHLASTKDI CRNDSLSRLH LDMSCSGNNS SPGVSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.17e-37bHLH family protein