PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019175197.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 358aa    MW: 38332.3 Da    PI: 10.2794
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019175197.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.42.2e-31286343359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D ++WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYegeHnh+
  XP_019175197.1 286 DDFSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPTMLIVTYEGEHNHS 343
                     99************************988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MAVELLSGYR NGGFAAAKME DNAVKEAAAA GFQSVEKLIR LLSQSQPQSS SGFSSSGSLA  60
PPAAGDYQAV ADVAVSKFKK FISLLDRTRT GHARFRRGPI CNPPAPQPLK KMDQESDPVP  120
SGQTRVIENS EKPHTGASKV YSPPPIQRLP PLPHNHHHLL KNGPAPEAAA RKESSTTINF  180
SASQATSSPG SFISSLTGDT ESLQPSLSSG FQITNLSQVS SAGRPPLSTS SFKRKCNSMD  240
DSSLKCGSAG GSASGRCHCP KKRKSRVKRV VRIPAISMKM ADIPPDDFSW RKYGQKPIKG  300
SPHPRGYYKC SSVRGCPARK HVERALDDPT MLIVTYEGEH NHSQSIGETP ASLILESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.12e-80WRKY family protein