PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019175168.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 405aa    MW: 43553.1 Da    PI: 8.1799
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019175168.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.35.1e-20205254255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp     + +r++lg+f tae Aa+a+++a+++++g
  XP_019175168.1 205 RYRGVRQRP-WGKWAAEIRDPQ----KaARVWLGTFETAEAAARAYDEAALRFRG 254
                     7********.**********93....36*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    
MCMFIKVAND GDSDEFAIFQ AAGNRREEIG AVESGYTESF EGIMQRQLQT ETDCVLSAAA  60
PPPIFSEFGQ MREMSAMVTA LTHVVSGQQR SYYQTETAPP VMAPVVGGSG VYSANSPSSV  120
YSSSSSGSLA GQKRRRDQEE GVTQFAEQAP RVYGGFRGGE SSSSSVKLET TNFITPPIMV  180
GATSTVTTAV ASAVQDQGSG ERRRRYRGVR QRPWGKWAAE IRDPQKAARV WLGTFETAEA  240
AARAYDEAAL RFRGNRAKLN FPENVRSLPP PQAAAISASQ LPANAPSQPS YQAHLQPSQG  300
SPAVAGDYLA YSQLLQNPGD VHGQRPNSLL EQMFRSSSMA VFHSHSFPSS SPSITAPSGP  360
FPLMTFSGQQ SSYFRPQSSQ SPTTGSSFQS PYWTNSGSQY PPSSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1201206ERRRRY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64750.15e-16ERF family protein