PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019175063.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 225aa MW: 25640.1 Da PI: 9.3431 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 87.4 | 8.1e-28 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA+EL +LCdaev viifsstgkly+y+s XP_019175063.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELGILCDAEVGVIIFSSTGKLYDYAS 59 8***********************************************86 PP | |||||||
2 | K-box | 88.1 | 1.7e-29 | 81 | 170 | 9 | 98 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++++ + +q+e+a L+++++nLq+++R+++Ge+L+ Ls+k+Lq+Le+qLe sl+ +R++K+++ll++i+el +k +++en +L +k+ XP_019175063.1 81 NQTSEVKFWQREAAMLRQQLQNLQENHRQMMGEELTGLSVKDLQSLENQLEMSLRGVRTRKDQILLDEIHELNQKGSLIHQENLELYNKV 170 678899*******************************************************************************99886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KAKELGILCD AEVGVIIFSS TGKLYDYASS 60 SMRSVIDRYK KVKEEDYQLA NQTSEVKFWQ REAAMLRQQL QNLQENHRQM MGEELTGLSV 120 KDLQSLENQL EMSLRGVRTR KDQILLDEIH ELNQKGSLIH QENLELYNKV YGSRGKNGIS 180 RNAILTNGLS INEDPHVPVN LQLCQPQQQN SENTSGATEL GLQLH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57230.1 | 5e-95 | MIKC_MADS family protein |