PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019175000.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | GeBP | ||||||||
Protein Properties | Length: 424aa MW: 46313.8 Da PI: 8.6359 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 117.3 | 8.6e-37 | 189 | 285 | 2 | 98 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 lfqrlwseeDei++L+G+i ++++++++p+ d++af++f+++s++++v+++ql +KirrLKkK++++ +k k+gke +fsk h+q++++lsk iW XP_019175000.1 189 LFQRLWSEEDEIAVLKGMIAYAEEKNADPVTDLNAFHDFIRESLHIDVTRTQLQDKIRRLKKKYENNARKEKKGKERTFSKIHEQNAYDLSKNIW 283 79********************************************************************************************* PP DUF573 97 gs 98 gs XP_019175000.1 284 GS 285 95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 424 aa Download sequence |
MAKNRPEPAK SVDTDEESEQ EEEEASSDEN GGSDSEPEPP LTQVSRTPVT KKPSASAPKK 60 PEPKRVSSSE ESDSESDGDS DSNPNVKPIA SKPMDDPKAP SAAATPTKKP RSKPAAPRPT 120 SPTKSAAGTK RPAADGEAKE SKKSKKKPSG EVESSGVKKS MTEDSKKKPT VEVENSAKKS 180 LTEDSKKQLF QRLWSEEDEI AVLKGMIAYA EEKNADPVTD LNAFHDFIRE SLHIDVTRTQ 240 LQDKIRRLKK KYENNARKEK KGKERTFSKI HEQNAYDLSK NIWGSLKAQN GSVVKAAETS 300 KASNASARKD RIKNAVIPVK ASTVAAAEVV DHVLDEEKEA NANMDVDTNV EGSKSLNLSG 360 GSLFGKSLNE LAEWIDKNKV GLSEEKLIEM EGKWKALKVA ELELFLKKAA LIQEQGRLVL 420 DALK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G11510.1 | 2e-25 | GeBP family protein |