PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019174958.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family BES1
Protein Properties Length: 322aa    MW: 34690.9 Da    PI: 8.4737
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019174958.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822212.98.1e-66261552132
          DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqs 96 
                     +++rkp+w+ErEnn+rRERrRRaiaakiy+GLRaqGny+lpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp   +e++g+sa+++p+ss + 
  XP_019174958.1  26 SGRRKPSWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCTEAGWIVEPDGTTYRKGCKPI-PMEIGGTSANITPSSSRNP 119
                     799************************************************************************.******************* PP

          DUF822  97 slkssalaspvesysaspksssfpspssldsislas 132
                     s+ ss++asp++sy+asp ss+ psp++ d + + +
  XP_019174958.1 120 SPPSSYFASPIPSYQASPLSSACPSPTRGDANISPH 155
                     ****************************99986543 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MMWEAGGSAA SLSGGGGEGG VGGSSSGRRK PSWRERENNR RRERRRRAIA AKIYTGLRAQ  60
GNYNLPKHCD NNEVLKALCT EAGWIVEPDG TTYRKGCKPI PMEIGGTSAN ITPSSSRNPS  120
PPSSYFASPI PSYQASPLSS ACPSPTRGDA NISPHPFVFL HNSIPSSLPA LRISNSAPVT  180
PPLSSPTRVL KQTFNLETLA KDSMSAFNIS FFASAPTSPT RGHRFPATIP ECDESDTSTI  240
DSGQWMSFQK YAPSVVPTSP TFNLMKPVAQ QIPSSDAMFT EEGKSMEFDF EKVAMKAWEG  300
ERIHEVGLDD LELTLGSGSA RS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12847RRKPSWRERENNRRRERRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75080.21e-114BES1 family protein