PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019174933.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 237aa    MW: 26224.8 Da    PI: 6.368
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019174933.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.61.7e-1181127554
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     +  rE+ RRdr+N++f+eL ++l +    + +K++K++iL  Av+ + +L
  XP_019174933.1  81 KAHREKMRRDRLNDRFQELSSVLDPG---KPPKMDKSAILSDAVRMVVQL 127
                     678**********************8...99*************988776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MAAPEEDCSN WLLDLGFEDI SVPGAHFPSL QPGFQWPPNA FSVPAAPSTG LDVSDGNSDL  60
LKECNSKKRA RSEACNAPDS KAHREKMRRD RLNDRFQELS SVLDPGKPPK MDKSAILSDA  120
VRMVVQLRDE AQKLKKSFDD LQEKVNELKA EKNELRDEKQ KLKTEKDKLE QQLKSLNSQP  180
SFLPHPPAIP APFAAPHQVV GSKLVPFVGY PGIPMWQFAP AAAVDTSEDH ALRPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.13e-82bHLH family protein