PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019174897.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 379aa MW: 41181.9 Da PI: 6.6294

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019174897.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	42.1	2.8e-13	18	115	11	128
NAM 11 deelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkkt 105 de++ L +kv++ + ++v ++++ y++ P++Lp +k wy ++++k+ ++g+Wka+g+ ++++ +g+ g + t XP_019174897.1 18 DEQIF--LLLEKVKNGSALPNNVSEDINTYHFLPSNLP------SKIWYLVQPTESKK---------SEHGFWKAKGEASRIYQ-NGSIYGWRST 94 55555..5666777666444478889999999999999......24577777665543.........468************.999*** PP NAM 106 LvfykgrapkgektdWvmheyrl 128 L f+ + p+g+kt Wv++ey+ XP_019174897.1 95 LEFF--EGPNGRKTGWVLQEYKT 115 ..789999*******86 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MCPPATTPPD AIDLYWTDEQ IFLLLEKVKN GSALPNNVSE DINTYHFLPS NLPSKIWYLV 60 QPTESKKSEH GFWKAKGEAS RIYQNGSIYG WRSTLEFFEG PNGRKTGWVL QEYKTEKGGY 120 SEKNPKQSRS LCTVFQCCGG SPNDMPSVKM LSSAPNANRA SGVGSTSESQ AKSKDAGSTQ 180 LPGVDEAIDD PRNEALINQL LMEDGLELDD LTGNIGALPA ANKAEDPEDI ITGDFLEMND 240 LDGKLSPSSS SGNSSHHNSF ASEDDFFATV RNMDDDNNNG DPKGKGSSYK CKNMGPVKPN 300 EVIIQLAPSG SLVKATGSKA AVETRPTSST NSNIHIKPPQ PQPLGGRGPL HRAATKNKFK 360 KVHGVAQKLY CDRRKTKET

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MCPPATTPPD AIDLYWTDEQ IFLLLEKVKN GSALPNNVSE DINTYHFLPS NLPSKIWYLV  60
QPTESKKSEH GFWKAKGEAS RIYQNGSIYG WRSTLEFFEG PNGRKTGWVL QEYKTEKGGY  120
SEKNPKQSRS LCTVFQCCGG SPNDMPSVKM LSSAPNANRA SGVGSTSESQ AKSKDAGSTQ  180
LPGVDEAIDD PRNEALINQL LMEDGLELDD LTGNIGALPA ANKAEDPEDI ITGDFLEMND  240
LDGKLSPSSS SGNSSHHNSF ASEDDFFATV RNMDDDNNNG DPKGKGSSYK CKNMGPVKPN  300
EVIIQLAPSG SLVKATGSKA AVETRPTSST NSNIHIKPPQ PQPLGGRGPL HRAATKNKFK  360
KVHGVAQKLY CDRRKTKET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-11	NAC family protein