PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019174834.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ZF-HD
Protein Properties Length: 294aa    MW: 31394.1 Da    PI: 8.1572
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019174834.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer101.17.8e-3274127357
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57 
                     ++rY+eClkNhAas+Gg+++DGCgEfmps geegt +alkCaAC+CHRnFHR+e 
  XP_019174834.1  74 RARYRECLKNHAASIGGNVTDGCGEFMPS-GEEGTLEALKCAACNCHRNFHRKER 127
                     689*************************9.999********************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MMALTGEDKE IRMSDSLAGY NPLEDLDQAQ AAQDLQHGGH ENKYAGATNI SPAAAGGGGG  60
VFKSKLSTTA GAPRARYREC LKNHAASIGG NVTDGCGEFM PSGEEGTLEA LKCAACNCHR  120
NFHRKERGGG GGDGIIVVHP LQLPGGPPMP SPSSINHHRN TPWGAPTSLA AQPVKMAFGS  180
GGGSAATDSS SEELNFNAYH SSSAIPSQSG LILAKKRYRT KFSQEQKDKM LEFAEKLGWR  240
IPREDDTQLQ TFCAEVGVKR QVFKVWMHNN KNSAKKNTPQ QEQDHQQPPG IAGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75240.15e-59ZF-HD family protein