PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019174751.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

TALE

Protein Properties

Length: 665aa MW: 73196.6 Da PI: 7.524

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019174751.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.3	1.4e-09	463	500	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps++++ L++++gL+++qV++WF N R + XP_019174751.1 463 FEHflHPYPSEADKHLLSRQTGLSKNQVSNWFINARVR 500 554459******************************88 PP
2	BELL	107.8	6.8e-35	323	394	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +r e q++k kLls+l+eVd rY +y++q+q+++ sF++v g+g+a+pYt+lA+ka+SrhFrc+kdai+ q+ XP_019174751.1 323 DRSEYQRRKIKLLSMLDEVDGRYARYCDQMQAMVTSFDTVLGYGAAAPYTTLAQKAMSRHFRCIKDAIMVQL 394 5899****************************************************************9996 PP

Sequence ? help Back to Top
Protein Sequence Length: 665 aa Download sequence
MSQGYPHHHQ EFYSSQNDYQ RSAAAAAAAA ASSMRIEPPP TYDSGGGILA EMINYPPEWR 60 KAATEILDDQ IQSSFRSSWP RQKEQHLSVN EALPFMNLHI KASSPPPPRP SSSALHMLNN 120 PNSGAGSDLS HHGYHHMLSP LSMEAAAPPS QFTWIPGSSS GAVVENDSAK IRSIIEAQGL 180 SLSLSSSLRN MEAAKLEELR IGNGAINYLH NQGLLEANNA ANYHPHPHPH QQLLHSGLAM 240 DLPPNTQVHV GYAATNVLRG SRYLKAAQEL LEEFCCVGRG HFKNQRAKKN ESGNPNSIAA 300 ESGNSPAGSS SSKEQPPPLS AADRSEYQRR KIKLLSMLDE VDGRYARYCD QMQAMVTSFD 360 TVLGYGAAAP YTTLAQKAMS RHFRCIKDAI MVQLKETYRL LGEKDPTGSS GLTKGETPRL 420 RVLDQKLRQQ KALNQMGMMD SEAWRPQRGL PERSVSVLRA WLFEHFLHPY PSEADKHLLS 480 RQTGLSKNQV SNWFINARVR LWKPMVEEMY QQESKEEEAE EQENAAAQSP TPDDSGNKGI 540 TATATTTTTT MPSPGGRRSE FIATENDPSR SYAIVNYSSS SSSRPHQHHH QYASTTVPHL 600 PDTASATSPR WEPPGMHGWG MVVDGDVRLG AAAQSTGDVS LTLGLRHSEN VPRNTRLSIR 660 DFGAF

Sequence ? help Back to Top

Protein Sequence Length: 665 aa Download sequence

MSQGYPHHHQ EFYSSQNDYQ RSAAAAAAAA ASSMRIEPPP TYDSGGGILA EMINYPPEWR  60
KAATEILDDQ IQSSFRSSWP RQKEQHLSVN EALPFMNLHI KASSPPPPRP SSSALHMLNN  120
PNSGAGSDLS HHGYHHMLSP LSMEAAAPPS QFTWIPGSSS GAVVENDSAK IRSIIEAQGL  180
SLSLSSSLRN MEAAKLEELR IGNGAINYLH NQGLLEANNA ANYHPHPHPH QQLLHSGLAM  240
DLPPNTQVHV GYAATNVLRG SRYLKAAQEL LEEFCCVGRG HFKNQRAKKN ESGNPNSIAA  300
ESGNSPAGSS SSKEQPPPLS AADRSEYQRR KIKLLSMLDE VDGRYARYCD QMQAMVTSFD  360
TVLGYGAAAP YTTLAQKAMS RHFRCIKDAI MVQLKETYRL LGEKDPTGSS GLTKGETPRL  420
RVLDQKLRQQ KALNQMGMMD SEAWRPQRGL PERSVSVLRA WLFEHFLHPY PSEADKHLLS  480
RQTGLSKNQV SNWFINARVR LWKPMVEEMY QQESKEEEAE EQENAAAQSP TPDDSGNKGI  540
TATATTTTTT MPSPGGRRSE FIATENDPSR SYAIVNYSSS SSSRPHQHHH QYASTTVPHL  600
PDTASATSPR WEPPGMHGWG MVVDGDVRLG AAAQSTGDVS LTLGLRHSEN VPRNTRLSIR  660
DFGAF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23760.2	1e-121	TALE family protein