PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019174419.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 318aa MW: 34555.8 Da PI: 9.9255

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019174419.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.4	6e-32	160	213	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH++Fv+av+ LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_019174419.1 160 PRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 213 9****************************************************7 PP
2	Myb_DNA-binding	45.9	1.3e-14	161	212	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ +v+av++lGg+ t+k++ + m+ k +tl ++ks++q+y+ XP_019174419.1 161 RMRWTSTLHAHFVHAVQLLGGHeraTPKSVLELMNvKDLTLAHVKSHLQMYR 212 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
MFLGSNAAMS GGGSATLPDL SLQISPPSIS SFELLRQRDG MATNKSSPSF CNINTDRSSS 60 MDSGSSGGSD LSHEHNGGVS FFPPGYQRSV ELSLSRRGFE LAAAAAAVGL SSPLSVQLQR 120 NSGLELPQHR HNFQPQIFGG RDFKRSGRMI GGMKRSVRAP RMRWTSTLHA HFVHAVQLLG 180 GHERATPKSV LELMNVKDLT LAHVKSHLQM YRTVKSTDKA PGALQQSCEK AEDMISTPPS 240 SLQTTTPRNA QRASWPPSLP EPNPLFHPHL RQNHAAEMDG RDDGTGRELC EMKGKFDRLS 300 SSSLSSSSDT FVNLEFTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42630.2	2e-49	G2-like family protein