PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019174408.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | B3 | ||||||||
Protein Properties | Length: 532aa MW: 59267.5 Da PI: 8.1595 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 58.4 | 1.3e-18 | 16 | 99 | 10 | 99 |
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + +s l +p kfa++++g++ s + +l +sg++W v + ++ +g+ ++ +GW Fvk++ L+ gD++vF++dg+ +f +v+vf++ XP_019174408.1 16 SISSEKLKIPSKFAKHMDGVT--SGMASLVGPSGNTWYVGV--SQLDGGLFFHDGWTVFVKDHCLEYGDSLVFRYDGDLDF--HVQVFDE 99 456677********8889995..459***************..9********************************98888..***9985 PP | |||||||
2 | B3 | 58.7 | 1.1e-18 | 244 | 339 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 f kv+++ +v+ s l +p +fa+eh ++++++++l++++g+sW v+ i ++ + ++++ +GW Fv++n+L+ gD+++F+l++ ++el+v XP_019174408.1 244 FTKVMKRFNVSGSFTLNVPYQFATEHL--PKCKVKIMLRNLKGQSWVVNSIPtTRVQTSHTFCGGWLAFVRDNNLDLGDICIFELVH--KGELRV 334 88999999******************6..34999****************77566666699***********************987..777899 PP EEE-S CS B3 95 kvfrk 99 +++r XP_019174408.1 335 RILRV 339 99985 PP | |||||||
3 | B3 | 49.7 | 6.6e-16 | 434 | 518 | 10 | 97 |
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 + s l +p +f eh +++ ++++l++++g+sW+v+ + + ++ +++ +GW Fv++n+++ gD+++F+l+g+ e ++v+++ XP_019174408.1 434 ISGSYTLKVPYQFSMEHL--PNCRTQIILRNLKGQSWTVNSVPTTRVQTlHTFCGGWMAFVRDNDIQMGDICIFELVGKCE--MRVHIC 518 455667999****99996..458889***************6655555579999**********************99544..577776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 532 aa Download sequence |
MSNGRKPHFL HGFNPSISSE KLKIPSKFAK HMDGVTSGMA SLVGPSGNTW YVGVSQLDGG 60 LFFHDGWTVF VKDHCLEYGD SLVFRYDGDL DFHVQVFDEG SCEKEAAFCA DCSQDVTNFE 120 NHAIKKRDRK SLGLLDCIAE GVPKRMRSTE IHSECPTSGQ ENPVTSSKED YVCGGELVCL 180 REMEIDGNPL KDFVTIAVPS QGKCVYENSV DATISSWTND EDVWLSTQEA ERAARSFTSS 240 FPNFTKVMKR FNVSGSFTLN VPYQFATEHL PKCKVKIMLR NLKGQSWVVN SIPTTRVQTS 300 HTFCGGWLAF VRDNNLDLGD ICIFELVHKG ELRVRILRVE KEGVNDHSSV TAHKPVANVK 360 GKHRSTLKSS FLHTQLNATG GQSVTRKCTS SQDKLGSSTK GCMSLKSAPE EKIAAQAFIS 420 SFPHFVRVMK KFNISGSYTL KVPYQFSMEH LPNCRTQIIL RNLKGQSWTV NSVPTTRVQT 480 LHTFCGGWMA FVRDNDIQMG DICIFELVGK CEMRVHICAI GKKGLDYQNG SI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 2e-19 | B3 family protein |