PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019174332.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family Dof
Protein Properties Length: 268aa    MW: 29594.8 Da    PI: 4.658
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019174332.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1214.4e-383288662
          zf-Dof  6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                     +cprC stntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rk+++s+
  XP_019174332.1 32 PNCPRCASTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKSRRSK 88
                    58***************************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MLSSESSPML ECHPIRPILM DRKWKPNIEL APNCPRCAST NTKFCYYNNY SLSQPRYFCK  60
SCRRYWTKGG SLRNVPVGGG CRKSRRSKSA RQAAEQHRSN AAAAAHHVPG GGFDNGSAGA  120
EEIDMAAVFA KYLNQGGDLQ DSGATSSTSA SMALSSLDSE SQVDELLLLD YQEGVDPPDP  180
LFMDQLVEEN NNGEHLLDYN QSALDLQALL EDDHWPNFAW QQPMIQQQDL GTFFGDDVVY  240
PTKSSTSLAN NDVWGSFDLS GCEILPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21340.12e-34Dof family protein