PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019173629.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | NF-YB | ||||||||
Protein Properties | Length: 254aa MW: 27825.6 Da PI: 4.1314 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 43.7 | 6.7e-14 | 19 | 112 | 8 | 96 |
NF-YB 8 lPianvsrimkkvlPanak...is..kdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 lP + v r++k l + +k +s ++a + e + fi ++++ a+d c + kr+t+n++d++ al ++ f ++++pl++ l+++r+ +++ XP_019173629.1 19 LPKTIVRRLVKDKLSQLSKdgeMSllREAHQAFSESARIFIHYLSAAANDVCMESKRQTMNAEDVFKALDEIEFSEFIDPLRASLEEFRQKHSK 112 78888899999887765552223333799************************************************************97765 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 254 aa Download sequence |
MADDKEKGAA MPEVEVEDLP KTIVRRLVKD KLSQLSKDGE MSLLREAHQA FSESARIFIH 60 YLSAAANDVC MESKRQTMNA EDVFKALDEI EFSEFIDPLR ASLEEFRQKH SKRKAAASKS 120 VESNKKAKNE EKPAENGMSK KKQESTDNKK GKNTKPAVKE NGASKAQPVG SEEKDGEETN 180 ESEEDDVQEG NESGAEDGQE GNGSESEDEQ EGNGREAENG QEENGSEAED GQEGNGSEEE 240 DGQEDDESGD TADD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G27470.1 | 1e-37 | NF-YB family protein |