PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019173590.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family BES1
Protein Properties Length: 261aa    MW: 29307.4 Da    PI: 8.9338
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019173590.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF82280.93.6e-2517731874
          DUF822 18 RERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgsk 74
                     ER RRa +a+++aGLR++ n++l  ra++n+V +AL+reAG++ve+DGtty    +
  XP_019173590.1 17 LERNRRAFTARMLAGLRQYSNFNLQPRAEMNKVTAALAREAGFTVEPDGTTYGSAAS 73
                    39**************************************************86554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MSGNAASATA NKSRKFLERN RRAFTARMLA GLRQYSNFNL QPRAEMNKVT AALAREAGFT  60
VEPDGTTYGS AASSNVSGII NNFCQLVDPG GVKQELQLLK SLNIDVVVVN CWWGIVEGKE  120
DQKYKWSGYR ELFDIIRDKG LKLQVVIAFN AYGGNDFKVD IPLPQWVLKI GKDIPEIFFT  180
GRVGRWNTEC LSWGIDKECI LEHRTGREGC YEFMRSFRAE FNDLFTKGLI SAVEIGLGAF  240
GESKYPSFSE RNGWRFPGIV S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45300.26e-82BES1 family protein