PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019173500.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MYB_related | ||||||||
Protein Properties | Length: 345aa MW: 37078.1 Da PI: 7.4546 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 40.7 | 5.3e-13 | 104 | 148 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ ++ + ++lG+g+W+ Iar Rt+ q+ s+ qky XP_019173500.1 104 PWTEEEHRMFLLGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKY 148 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 345 aa Download sequence |
MTRRCSHCSN NGHNSRTCPN RGVKLFGVRL TDGSIRKSAS MGNLTHYAAG NGGAGSTTPH 60 NGIAHDSPGD TPDHPAAAAA ADGYASEDFV PGSSSSRERK KGVPWTEEEH RMFLLGLQKL 120 GKGDWRGIAR NYVVSRTPTQ VASHAQKYFI RQSNVSRRKR RSSLFDIVAD EPVDTPMESQ 180 DFLSTNHLEA EPQSNNNALP PPPNLDEECE SMGSAAAANS NDGEPMQHPN PETSQYSYPV 240 VYPAAAAAYV TPIYPLPIPY WAGYCPEPAK AEKHEVFKPT AVHTKSPINV DELVGMSKLS 300 LGESLGDVKP SVSLKLVEGS TRQSAFHAKP AATSGNSSHN PIHAV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47390.1 | 1e-120 | MYB_related family protein |