PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019173384.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MYB | ||||||||
Protein Properties | Length: 269aa MW: 30895.1 Da PI: 9.8321 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.6 | 2.2e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd+ll ++++++G g W++++ + g++R++k+c++rw++yl XP_019173384.1 14 KGAWSEEEDDLLRKCIQKFGEGKWHLVPFRAGLNRCRKSCRLRWLNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.1 | 1.4e-15 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg ++ eE +l+++++k+lG++ W++Ia +++ gRt++++k++w+++l XP_019173384.1 67 RGHFSLEEADLILRLHKLLGNR-WSLIAGRIP-GRTANDVKNYWHSHL 112 799*******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 269 aa Download sequence |
MVNSSARWSP RVRKGAWSEE EDDLLRKCIQ KFGEGKWHLV PFRAGLNRCR KSCRLRWLNY 60 LHPDIKRGHF SLEEADLILR LHKLLGNRWS LIAGRIPGRT ANDVKNYWHS HLKKKVVGMH 120 MASSNSSRQD NNWDDEKGKA PQIKENILFR PRPRRFFRTS LSSPALSTLT GKAKAVAYDA 180 PPPPHHHQLQ AQPEATSPPA DLLMVFNVQQ NNNSMATNFP AQTTAPPSHD GVKWWDLLYD 240 DDHQGLIDWT TDDDFPIDVD LLKLLDTTI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 2e-56 | MYB family protein |