PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019173159.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 270aa MW: 30061.1 Da PI: 8.2568 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.8 | 9.1e-19 | 124 | 178 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tk q Lee F+++++++ +++++LA++l+L rqV vWFqNrRa+ k XP_019173159.1 124 RKKLRLTKAQSALLEESFKQHSTLNPKQKQDLARELNLRPRQVEVWFQNRRARTK 178 678899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 124.6 | 4.6e-40 | 124 | 213 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rl+k q++lLEesF+++++L+p++K++lareL+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l++en+rL+kev+eL+ +l XP_019173159.1 124 RKKLRLTKAQSALLEESFKQHSTLNPKQKQDLARELNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKEVQELK-AL 213 69*************************************************************************************9.55 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence |
MGFDDICSTG LVLGLGFSCS DQASKVDVVH KAARKPPPMS FEPSLTLSLS GETFDRQAVK 60 KVVAAANNKV CVDQSATDLY RQDSAASSYS NASVKRERES EEAEMERVSS RVISDEDDDG 120 GNCRKKLRLT KAQSALLEES FKQHSTLNPK QKQDLARELN LRPRQVEVWF QNRRARTKLK 180 QTEVDCEFLK KCCETLTDEN RRLQKEVQEL KALKLAQPFY MQLPAATLTM CPSCERIGGA 240 AVEASNKSPF TMAPKPHFFN PAFTNPSAAC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 173 | 181 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22800.1 | 1e-87 | HD-ZIP family protein |