PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019172981.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ZF-HD
Protein Properties Length: 313aa    MW: 34687 Da    PI: 8.2073
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019172981.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer104.37.8e-33108163359
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                     +vrYk ClkNhAas+Ggh++DGCgEfmps ge+gt++alkCaAC+CHRnFHR+e + 
  XP_019172981.1 108 SVRYKACLKNHAASMGGHVIDGCGEFMPS-GEDGTPDALKCAACDCHRNFHRKEIDG 163
                     79**************************9.999********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MEVRGSSQQQ KDMRILQNSI GGGYPSSRIS HHRLQEPLSS LDRRNNGLII ENHHPMQTLD  60
QLHLAQDDEA ANPDPDPGVL PAGPGNSAAV AAPPQVLPET SANGSGNSVR YKACLKNHAA  120
SMGGHVIDGC GEFMPSGEDG TPDALKCAAC DCHRNFHRKE IDGEAPPPPY FPFTPAINNH  180
HHRVHTPHSA PVAMPPRNLH HYSHGLQVPP VMMAFGGGAP AESSSEDLNL FNHARGQVLH  240
NPSPFSVSRK RFRTKFTQQQ KDSMHEFAEK LGWKIQKQDE QQVLQFCSEM GIKRQVFKVW  300
MHNNKQNFKK PQM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75240.16e-63ZF-HD family protein