PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019172943.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 321aa    MW: 34667.2 Da    PI: 6.7946
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019172943.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.56.7e-10233276755
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++ ++RR+ri +++  L+el+P+       K++ +++LekA+ Y+k Lq
  XP_019172943.1 233 IAAKNRRERISERLKILQELVPNG-----SKVDLVTMLEKAISYVKFLQ 276
                     5679*******************5.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MEVDKNLESC ESYYANEFGP GSDHSSPEIY AINDGGGSSE KTMGNRDGVA VAAKSFVPSG  60
ASSRLSSPSS SNSNGGMQGY HHAAATKYLS EEEDGRSVIT FRGGQFGNLT HASGPSLLSF  120
DQNQAFYPSF WDETMQYNNN NTSGNYQNTP KCSAASPGHL VENSGSNIPF GWLNPNTDSG  180
GAATIQEHGR QESSSLTKRP YTEESLQASK KQCTTATKKA KTSSIPSKDP QSIAAKNRRE  240
RISERLKILQ ELVPNGSKVD LVTMLEKAIS YVKFLQLQVK VLATDEFWPM QGGKAPDLSQ  300
VKEAIDAIIL ASQKDRNSSS K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66470.13e-52bHLH family protein