PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019172934.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | bHLH | ||||||||
Protein Properties | Length: 374aa MW: 40866.6 Da PI: 6.854 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.6 | 5.2e-09 | 197 | 244 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k + Ka +L + ++Y++sLq XP_019172934.1 197 SHSLAERARREKISKKMKCLQDLVPGC----NKVVGKAGMLDEIINYVQSLQ 244 8*************************9....677*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 374 aa Download sequence |
MLRCAQSSPE NNNVSYSAAD LSVLERQRAI FQRLYQPIIH DNHLAGAGAP APENPFPALL 60 DGNLTNLASL WHAEENSPNA VVDVHGRETG KLSRSSSSIT AAAVPTSSKA NDQNATPGGG 120 RANGTATSTR KRKAEEDKKW EGETTDVQSE ITVKCERETS GSSASKENKK SSGGSGEDVQ 180 KSDYIHVRAR RGQATDSHSL AERARREKIS KKMKCLQDLV PGCNKVVGKA GMLDEIINYV 240 QSLQKQVEFL SMKLAALNPR LEFNMDNLFP KELPAYMGSF PAAAAAMPLE AVNAAFLHYN 300 PLQQFATATS RGGAASMETD MVRSDVQIML PHHQRKENNP SESIPEAYLD SSYFPQLQGW 360 ESECWQTPFN GSFH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36540.1 | 3e-52 | bHLH family protein |