PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019172678.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 269aa    MW: 30602.7 Da    PI: 6.3209
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019172678.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.45.4e-0879125654
                     HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                       +Er+RR+++   + +L  l+P       ++K s ++ L+++v+Y+k+L
  XP_019172678.1  79 RDVERQRRKEMGGLYRNLIALIPYeY---IKGKRSTSDRLQETVKYVKDL 125
                     579*********************77...*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MGEKGSMFPF QENGFLDFSS SFHPLQHQTV LRPQAFDHSS LMAAEIPTNG LDFAGNYKHG  60
VVQKNPNFNG GDEKKLLRRD VERQRRKEMG GLYRNLIALI PYEYIKGKRS TSDRLQETVK  120
YVKDLRVRVE GLKGRREELK DHLCSSSTNS MNNNAVKKCS IIDKEEEEEE EEEEEEEDND  180
DDEGCKVTVK HCRGGIEVIV NIASCRRNEV PLSKLLRAIV MGGGISITTC IFTKVNKRLL  240
HCIEAEVVEG RSIDVAQLEQ KLMNLVYSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62975.16e-28bHLH family protein