PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019172370.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | bHLH | ||||||||
Protein Properties | Length: 248aa MW: 28067.9 Da PI: 7.422 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 23.4 | 1.1e-07 | 25 | 72 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 + +E++RR++++s + L +llP + ++++ + L ++v+YIk L+ XP_019172370.1 25 KYIEKNRRNHLKSLYTDLFSLLPAhQ---MQERMALPDQLDETVKYIKCLE 72 569*********************55...9999***************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MGREKGQSSR LTTTTKTPAP KLERKYIEKN RRNHLKSLYT DLFSLLPAHQ MQERMALPDQ 60 LDETVKYIKC LENQLEKSRQ KKEELLQKSR KTPNSSSCRN CIPAAGEQTE PPEIQVVDTS 120 PGMSVVLING LESISQFYGI IRVLHKQQGL QVTNATFQIH GNSTLQVAHE QVGKSEMGMI 180 AERLKVVIKG CPGGEAIESE PLNSWDNNYD IERDNLGFPV LEQFLVQCQN PPPSFFWTAG 240 NEYYCAQN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 2e-25 | bHLH family protein |