PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019172358.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 247aa    MW: 27997.7 Da    PI: 6.3595
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019172358.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.25.3e-072570655
                    HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    + +E++RR++++s +  L +llP      ++++   + L ++v+YIk L+
  XP_019172358.1 25 KYIEKNRRNHLKSLYTDLFSLLPAH----QERMALPDQLDETVKYIKCLE 70
                    569*********************8....6999999***********985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MGREKGQSSR LTTTTKTPAP KLERKYIEKN RRNHLKSLYT DLFSLLPAHQ ERMALPDQLD  60
ETVKYIKCLE NQLEKCRQKK EELLQKSRKT PNSSSCRNCM AAAGEQSEPP EMQVVDTSPG  120
MSVVLINGLE SIFQFYGIIR VLHKQQGLQV TNATFQIHGN STLQVAHEQV GKSEMGMVAE  180
RLKEVIKGCP GGEAIESEPL NSWDNNYDIE QENLGFPVLE QFLVQCQNDP PPSFFWTAGN  240
EYYCAQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.14e-25bHLH family protein