PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019172056.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NAC | ||||||||
Protein Properties | Length: 353aa MW: 40238 Da PI: 5.083 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 179.4 | 9.4e-56 | 9 | 138 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv +yL+kkv+++k++l +vi+++d+y++ePwdL+ k ++e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+v XP_019172056.1 9 VPPGFRFHPTDEELVGYYLRKKVASQKIDL-DVIRDIDLYRIEPWDLQdKcrIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAV 102 69****************************.9***************943432233667************************************ PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++ k +l+g++ktLvfykgrap+g+ktdW+mheyrle XP_019172056.1 103 YD-KAKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLE 138 **.999*****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 353 aa Download sequence |
MDTDESCTVP PGFRFHPTDE ELVGYYLRKK VASQKIDLDV IRDIDLYRIE PWDLQDKCRI 60 GYEEQNEWYF FSHKDKKYPT GTRTNRATMA GFWKATGRDK AVYDKAKLIG MRKTLVFYKG 120 RAPNGQKTDW IMHEYRLESE ENGPPQEEGW VVCRAFKKRI TGQAKSMESW ESNFLYDEPN 180 INNMDYMTRQ AAAAAAPSNF MAAQTFLCKQ ELEASENLTF MHADQLFNQL PQLQSPSLPL 240 LKTPLLPENH RSNASEDDAS AGEQIKKMNC VSDKKVTDWR ALDKFVASQL SHDVNQESFE 300 DHHGCDEMGS LLLLQSEMRD NNGGGGGGSG RLNDFLSSGS SEFDNIGICI FDK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G18060.1 | 1e-133 | NAC family protein |