PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019171588.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | bHLH | ||||||||
Protein Properties | Length: 198aa MW: 21648.3 Da PI: 7.7232 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 40.4 | 5.3e-13 | 10 | 61 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55 r+ + +Er+RR++++ +++L +l+P++ +s+ ls + L +Av YIk+Lq XP_019171588.1 10 RADRKTVERNRRNQMKALYSTLNSLVPHQ---QSTEmLSLPDQLDEAVSYIKKLQ 61 667789**********************9...89999*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MDEQNRNPSR ADRKTVERNR RNQMKALYST LNSLVPHQQS TEMLSLPDQL DEAVSYIKKL 60 QIKLERMKEK KESLRGGCSS HDHQSSSIAA SRSSNGGGGM AAAVGGLKLP HVDIHHVDSA 120 VEVVLITGGG GVDCSQSSMF NDVLRMLHEE GADIISASFS SLDNMVFHTI HSQIEKSGCA 180 YKAQRISERL HSFVNGAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 3e-37 | bHLH family protein |