PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019171376.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | YABBY | ||||||||
Protein Properties | Length: 229aa MW: 25313.8 Da PI: 7.9362 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 230.5 | 4.1e-71 | 19 | 190 | 6 | 169 |
YABBY 6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaa..eshldeslkee...lleelkveeenlksnvekeesasts 95 s+q+Cyv+Cn C+t+lavsvP tslfk+vtvrCGhCt+ll vn++ + ++hl+ + ++ +l+e +++ n+ ++++++++a +s XP_019171376.1 19 PSDQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCTNLLPVNMRGLILPSPPpnHHHLHSFFSPShnsILDEISNSNPNFLMMNVHHQAAAAS 113 79*****************************************9999886655410455666666557778999999999998888888888877 PP YABBY 96 vssekl..senedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169 + + l +e+pr+pp ++rPPekrqrvPsaynrfikeeiqrika+nPdi+hreafsaaaknWahfP+i fg XP_019171376.1 114 SAEFVLplRAAGFDELPRPPPlINRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDITHREAFSAAAKNWAHFPHIQFG 190 77777644667789*****9999*****************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MSFSSSSSSS LDHRSPLPPS DQLCYVHCNI CDTVLAVSVP CTSLFKTVTV RCGHCTNLLP 60 VNMRGLILPS PPPNHHHLHS FFSPSHNSIL DEISNSNPNF LMMNVHHQAA AASSAEFVLP 120 LRAAGFDELP RPPPLINRPP EKRQRVPSAY NRFIKEEIQR IKAGNPDITH REAFSAAAKN 180 WAHFPHIQFG IMPDHQATVK KSNVRPQDGE DMLIKDGLFA SADVGISPY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00180.1 | 4e-68 | YABBY family protein |