PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019171282.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 325aa MW: 35710.3 Da PI: 8.098

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019171282.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99	3.2e-31	24	77	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH++F++a++ LGG++kAtPk +l+lm+v++Lt++hvkSHLQ+YR+ XP_019171282.1 24 PRLRWTPDLHSCFLHAINALGGQHKATPKLVLQLMNVPDLTISHVKSHLQMYRS 77 8****************************************************7 PP
2	Myb_DNA-binding	42.3	1.7e-13	25	76	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +++a++ lGg t+k++ + m+ +t ++ks++q+y+ XP_019171282.1 25 RLRWTPDLHSCFLHAINALGGQhkaTPKLVLQLMNvPDLTISHVKSHLQMYR 76 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MGSCGRSSGG SGSGVRQYVR SKVPRLRWTP DLHSCFLHAI NALGGQHKAT PKLVLQLMNV 60 PDLTISHVKS HLQMYRSMKP DLSNQEEDKN SAEEKTKQPF VDVVRTAAAA HARHDYHHLS 120 SSSPSSSSSL VFQLNPCPLP SKRGGRTEES ASWGMSSEKH KVGKGREKRR IICEEECCCL 180 FCGLNKNPPT PSPYFCNATQ PPECPNHSSS LNAFCNLPPF IPTHQELDFF KVVEGGGKEE 240 KWKTSKKRKR ESEEEKDEEE GCRLSLSLSI LPPPSTQTSN NNASSTSEIS EAAAISSCSN 300 PNPNPNFGLL LKPPILNLDL SLCID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	2e-29	G2-like family protein