PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019170922.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ARR-B | ||||||||
Protein Properties | Length: 608aa MW: 67041 Da PI: 6.2075 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 90 | 2.1e-28 | 196 | 249 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G+ekA+Pk+ilelm+v+gL++e+v+SHLQkYRl XP_019170922.1 196 KPRVVWSIELHRKFVAAVNQL-GIEKAVPKRILELMNVEGLSRENVASHLQKYRL 249 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 37.2 | 6.7e-12 | 198 | 248 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+qlG + +k+I + m+ +g++++++ s++qky+ XP_019170922.1 198 RVVWSIELHRKFVAAVNQLGIEkaVPKRILELMNvEGLSRENVASHLQKYR 248 678***********************************************7 PP | |||||||
3 | Response_reg | 79.8 | 9.5e-27 | 26 | 134 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vdD+p+ ++ll+ +l+k +y +v+++++++ al++l+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++a+++ +++ + + G XP_019170922.1 26 VLAVDDDPICLKLLEGLLRKCQY-HVTTTSQARMALKMLRENKdrFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANSDTKLVMKGVTHG 118 799********************.***************888889*******************87754.558********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l+Kp+ +eel++ XP_019170922.1 119 ACDYLVKPVRIEELRN 134 **************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 608 aa Download sequence |
MTVEETRRNM GVDRENYHNF PVGMRVLAVD DDPICLKLLE GLLRKCQYHV TTTSQARMAL 60 KMLRENKDRF DLVISDVHMP DMDGFKLLEL VGLEMDLPVI MLSANSDTKL VMKGVTHGAC 120 DYLVKPVRIE ELRNIWQHVI RKSKGQNKFD DQDNGYRGGQ GFPLTGSGEQ NALLNKKRKD 180 EEDETNENED PSTQKKPRVV WSIELHRKFV AAVNQLGIEK AVPKRILELM NVEGLSRENV 240 ASHLQKYRLY LKRISSVATQ QANMVAALRG KDSAFMRMAS LDGLGDFQSL GGPGRFNHTT 300 LSTYTPADML GRLSSATGIS IRNLSAHNHA QNLENSLGSD GNLNPNISLS SHNAASLFQG 360 IPSPLAVQEL NPLENSRALT AFSDSGSVIG SSTNPIMLQG SPKQELIGGG FGNQHSLNMA 420 SLSSELYNTG VNSSSNFLGH GRCSENWQAS IQVSEFQSGS YPLTETFSHS QLPQNCEREH 480 DLHSSPVACT TFEDSREAQV PRQQNQNSND IFRNLSSHVP GNGMTPSLSQ GSLVLFHQNG 540 NEMATPNPRT RSNEDNLLES TKTHGAFVSQ GFDALDDLMN AVIKQEEDNR GTLDGEFGFG 600 AYPFGSCI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 1e-123 | ARR-B family protein |