PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019170538.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MYB | ||||||||
Protein Properties | Length: 204aa MW: 23245.8 Da PI: 10.9136 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.3 | 1.8e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + +WT++Ed++lv +v+q+G g+W++ +++ g++R++k+c++rw +yl XP_019170538.1 14 KRPWTPDEDQKLVAYVQQYGHGSWHALPSKAGLKRCGKSCRLRWTNYL 61 579*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 47.6 | 3.7e-15 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia++++ Rt++ +k++w+++l XP_019170538.1 67 RGKFSRQEEQTIIQLHALLGNR-WSAIAAHLP-MRTDNGIKNYWNSHL 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MGSSPCFENV GLKKRPWTPD EDQKLVAYVQ QYGHGSWHAL PSKAGLKRCG KSCRLRWTNY 60 LRPDIKRGKF SRQEEQTIIQ LHALLGNRWS AIAAHLPMRT DNGIKNYWNS HLKKRLSKMG 120 IDPTTHKPKS NPFGFKEAAN LRHMAQWETA RLEAEARLVR RHSTMFGSSL HKPPSKPPPP 180 PTVPPTLDVL KAWQAAWTEP PMTA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15310.1 | 2e-81 | MYB family protein |