PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019170515.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 449aa    MW: 49038.6 Da    PI: 7.6944
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019170515.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY109.71.3e-34201257259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     dDgynWrKYGqK++kgsefprsYY+Ct+++Cpvkkkvers  d++++ei+Y+g+Hnh+
  XP_019170515.1 201 DDGYNWRKYGQKPIKGSEFPRSYYKCTHPNCPVKKKVERSL-DGQITEIIYKGKHNHQ 257
                     8****************************************.***************8 PP
2WRKY108.23.9e-34355412259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYGqK+vkg++fprsYY+Ct+++C+v+k+ver a+dpk+v++tYeg+Hnh+
  XP_019170515.1 355 EDGYRWRKYGQKVVKGNPFPRSYYKCTTPECNVRKHVERLASDPKAVITTYEGKHNHD 412
                     8********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    
MAENHAGRAS TSSSLRSASA RPTITLPALS PMDGLFTGGV SPGPMTLVSS LFAENDQESE  60
CRSFSQLLAG AMAFPGVRPQ LPATAAVHAN SKEEEGGGDV DFSFRNNRPA GLAITQPSIF  120
TIPPGFSPAS LLDSPGQGHF GISHQQALAQ LTSQPRILSD HPSSSLPPAP QFLDPNSIKE  180
SSNVSDNISE PYSFPVDKPA DDGYNWRKYG QKPIKGSEFP RSYYKCTHPN CPVKKKVERS  240
LDGQITEIIY KGKHNHQPPQ PRKGAKDTGN QNGLQVSSEL NLMDGVAFQS LPMKDLATKE  300
NMSGSSESDK LGDDDERESK RRATEGQIPE PVTSHRTVTE PKIVVQTTSE VDLLEDGYRW  360
RKYGQKVVKG NPFPRSYYKC TTPECNVRKH VERLASDPKA VITTYEGKHN HDVPAARNSS  420
HNTINNASAL QLRQHNPAAL LQFKEEQIT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03340.11e-144WRKY family protein