PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019170373.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | bHLH | ||||||||
Protein Properties | Length: 685aa MW: 74108 Da PI: 7.2862 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 50 | 5.2e-16 | 384 | 430 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K +Ka++L +A+eY+k Lq XP_019170373.1 384 VHNLSERRRRDRINEKMRALQELIPNC-----NKADKASMLDEAIEYLKTLQ 430 6*************************8.....6******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 685 aa Download sequence |
MPLSEFLKML KNESGERKPT SSSADDLSPL PGSDFSELVW ENGQITMQGQ SSKAKKSDNL 60 SRMREKCVGN ASSSRIGKLD LAGSVLDEMP PSVPSGEMDL SQDDEIAPWL NYSPSNGQSQ 120 EYGSQLLPEI SGTTANEPSP HDGFPLIGAS KSVVNSGQRN ATKLDCSPRF GLLASWSSQQ 180 ANPLVSGVSD IGSSNGSINL DSILKDSVPP QAKNQDTETT RTCPPTLLNF SNFSRPVVLA 240 RANLQNTLEA KGKREKEIKE NAQNPAKTAL IEACSTSRKE SDLKSQPNLR TKFEQTDASR 300 EDTNDADKVH GNKAVEPGAC SSVCSGSSAE RASNDQSHSL KRRARENEES GCPSEDADEE 360 SAGAKKAAPA RGGTGQKRSR AAEVHNLSER RRRDRINEKM RALQELIPNC NKADKASMLD 420 EAIEYLKTLQ LQVQIMSMGA GLCMPQMMFP AGMHHHMHAQ MPHFPQMGLG IGMGMGFGMG 480 LPELNGARSP GCPIFPMPAM PRPHFHSPSI SGPINFPGMA TATSNIQAFG HPCQGVPMSV 540 PRTPFVPLSQ QPSASSAPGL NASKMRMDGE SEDPVKIKNL QMTQNSDPIP SRLKNQTSQV 600 QTTSDQQPNA SDNPTVNPTN STNVPGSKQQ VCNVTRDAER KEQKRAEAPR IVNSIQYIRR 660 HLIEDGLCCA QRNEIAFIRK GDIAE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 389 | 394 | ERRRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09530.2 | 5e-57 | bHLH family protein |