PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019170326.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 729aa MW: 80054.8 Da PI: 5.8881 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.9 | 2e-19 | 61 | 116 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +++t++q++e+e++F+ +++p+ ++r++L ++lgL+ qVk+WFqN+R+++k XP_019170326.1 61 KKRYHRHTQHQIQEMESFFKDCPHPDDKQRKDLGRRLGLEPLQVKFWFQNKRTQMK 116 688999***********************************************998 PP | |||||||
2 | START | 222.4 | 1.4e-69 | 250 | 470 | 1 | 206 |
HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS START 1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 ela +a++el+++a+ +ep+W s+ + + ++e++++f+++ + ++ea+r+s+vv+m++++lve+l+d++ qW++ +a +a+tl XP_019170326.1 250 ELAVAAMEELIRMAQTGEPLWLPSPdnsiKVLCEEEYVRTFPRGIGpkplgLKSEASRESAVVIMNHVNLVEILMDVN-QWSNVFAgivsRAMTL 343 57899********************888888889*********999********************************.**************** PP EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS START 83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170 ev+s+g galq+m+ae+q++splvp R+ +fvRy++q+++g+w++vdvS+d ++ p + R++++pSg+li++++ng+s+vtw+ehv XP_019170326.1 344 EVLSTGvagnynGALQVMSAEFQVPSPLVPtRENYFVRYCKQHTDGTWAVVDVSLDTLRPSP----ISRCRRRPSGCLIQEMPNGYSRVTWIEHV 434 ************************************************************99....6**************************** PP E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206 ++++r +h+++r+lv+sgla+gak+w atl+rqce+ XP_019170326.1 435 EVDDRAVHSIYRPLVNSGLAFGAKRWIATLDRQCER 470 **********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 729 aa Download sequence |
MFQPNMYESH HHLLDMSSHK NPENELDNII RDEEYESKSG TDIMEAPSGD DQDPNQRPNK 60 KKRYHRHTQH QIQEMESFFK DCPHPDDKQR KDLGRRLGLE PLQVKFWFQN KRTQMKAQHE 120 RSENSQLRAE NEKLRADNIR YQEALGNATC PNCGGPAAIG EMSFDEQQLR IENVRLREEI 180 ERITQIAAKF VGKPMLSYPN LPPPGATRSL DLGVGNFGHQ PGLSGELYSA GDLLRSVSGP 240 TDADKPMIIE LAVAAMEELI RMAQTGEPLW LPSPDNSIKV LCEEEYVRTF PRGIGPKPLG 300 LKSEASRESA VVIMNHVNLV EILMDVNQWS NVFAGIVSRA MTLEVLSTGV AGNYNGALQV 360 MSAEFQVPSP LVPTRENYFV RYCKQHTDGT WAVVDVSLDT LRPSPISRCR RRPSGCLIQE 420 MPNGYSRVTW IEHVEVDDRA VHSIYRPLVN SGLAFGAKRW IATLDRQCER LASSMANNIP 480 SVDGGVITSP EGRKSMLKLA ERMVMSFCAG VGASTAHTWT TLSGSGADDV RVMTRKSIDD 540 PGRPPGIVLS AATSFWLPVP PKRVFDFLRD ENSRSEWDIL SNGGLVQEMA HIANGRDPGN 600 SVSLLRVNSA NSSQSNMLIL QESCADSTGS FVIYAPVDIV AMNVVLSGGD PDYVALLPSG 660 FAILPDGPPG NGVLNPEIGS GGSLLTVAFQ ILVDSVPTAK LSLGSVATVN SLIKCTVERI 720 KGAVACDSA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G04890.1 | 0.0 | HD-ZIP family protein |