PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019170253.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Dof

Protein Properties

Length: 355aa MW: 38078.9 Da PI: 8.6698

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019170253.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.7	3e-39	61	121	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++alkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+ + XP_019170253.1 61 NQQALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRIK 121 57899*****************************************************875 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MVGSNCDEKM AVISSTANEW PLHHHQKNQI DGRSLMGSSG ARVMEKPMNG QDQALPPPPP 60 NQQALKCPRC DSSNTKFCYY NNYSLSQPRH FCKACKRYWT RGGTLRNVPV GGGCRKNKRI 120 KRPSAAPPSA SSSATHDHHI SASSSSTPNL QVQAQMDHHH INPLLYGLPT STPSELGLSF 180 PRLFSSRVSN FEGTISGYDH HHHHMGLGFS SSSPSGLLGG ENGFANNTSN NSLLSSYHGG 240 SSSSSTSTLA SLIASSLHQG ANNNGFHGLS PYGEMQVGSG NMGSGEMPKE VKMEGDGQNR 300 LSNWNNNNGL SSHYQIMNQT GQINTSSSDN PSLPWNNGGS WFDPSNIGSS VPSIL

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MVGSNCDEKM AVISSTANEW PLHHHQKNQI DGRSLMGSSG ARVMEKPMNG QDQALPPPPP  60
NQQALKCPRC DSSNTKFCYY NNYSLSQPRH FCKACKRYWT RGGTLRNVPV GGGCRKNKRI  120
KRPSAAPPSA SSSATHDHHI SASSSSTPNL QVQAQMDHHH INPLLYGLPT STPSELGLSF  180
PRLFSSRVSN FEGTISGYDH HHHHMGLGFS SSSPSGLLGG ENGFANNTSN NSLLSSYHGG  240
SSSSSTSTLA SLIASSLHQG ANNNGFHGLS PYGEMQVGSG NMGSGEMPKE VKMEGDGQNR  300
LSNWNNNNGL SSHYQIMNQT GQINTSSSDN PSLPWNNGGS WFDPSNIGSS VPSIL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28310.2	4e-35	Dof family protein