PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019170134.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Dof

Protein Properties

Length: 267aa MW: 28988.4 Da PI: 6.6594

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019170134.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	112.2	2.4e-35	45	101	3	60
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 + lkcprC s+ntkfCyynny+ sqPr+fCk+C+r+Wt+GG+lrnvPvGg+ rknk+ XP_019170134.1 45 AEPLKCPRCASANTKFCYYNNYNKSQPRHFCKGCKRHWTEGGTLRNVPVGGS-RKNKR 101 6789*********************************************976.66665 PP

Sequence ? help Back to Top
Protein Sequence Length: 267 aa Download sequence
MGLSTKQVSG GDHQPGIIEW DNNPQTGGST RLDLPAAVQP PQKAAEPLKC PRCASANTKF 60 CYYNNYNKSQ PRHFCKGCKR HWTEGGTLRN VPVGGSRKNK RLKTPPNPTA AAATADQKPG 120 EQKNKNAPTI FFPADPVIGA AAATAAFNIG PSSTPMVLHD DQDTTAKLLP FSFSTYFDPI 180 SCSIPSFNTQ SSSYSDIIGE LDNVEESTIT TVMPFTSSTI ISHQPWQQDQ AITDMGINYW 240 SLSDIDSLVS ADLNIPWDDL EIKPKGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28310.2	3e-29	Dof family protein